Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 AL603756.1-201ENST00000606511 2163 ntBASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 AL353801.3-201ENST00000609898 542 ntBASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 AL049757.1-201ENST00000616842 1596 ntBASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 Z83836.1-201ENST00000624605 1642 ntBASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-3A0A0A0MS03 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC092068.3-201ENST00000587894 2016 ntBASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 AL359075.1-203ENST00000462729 1002 ntBASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRBV5-3A0A0A0MS03 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRBV5-3A0A0A0MS03 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRBV5-3A0A0A0MS03 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC125634.1-201ENST00000438758 1403 ntBASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 HOMER2P1-201ENST00000455653 964 ntBASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC122714.2-201ENST00000502787 707 ntBASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 IGHV3-52-201ENST00000519770 353 ntBASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC097493.4-201ENST00000641197 219 ntBASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV5-3A0A0A0MS03 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms