Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 KRT18P58-201ENST00000527480 1120 ntBASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 AC116407.2-201ENST00000613639 860 ntBASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 MIR7706-201ENST00000613747 67 ntBASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 AC023511.2-201ENST00000618803 211 ntBASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 AP000867.4-201ENST00000641616 219 ntBASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 OR6D1P-202ENST00000641007 5290 ntBASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TSSC4Q9Y5U2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 AL513477.1-201ENST00000602865 2407 ntBASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 AC124067.4-201ENST00000519691 2379 ntBASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 AC243591.1-201ENST00000452967 1364 ntBASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 AC046158.3-201ENST00000624947 2558 ntBASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 RPS2P1-201ENST00000434010 821 ntBASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 AC106730.1-201ENST00000566722 1090 ntBASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.75□□□□□ -0.21
TSSC4Q9Y5U2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TSSC4Q9Y5U2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms