Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 IGHV3-52-201ENST00000519770 353 ntBASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 AD001527.2-201ENST00000622994 785 ntBASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RAI2Q9Y5P3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 PMS2P1-201ENST00000431037 1228 ntBASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 ABCD1P5-201ENST00000445663 754 ntBASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 AL353593.2-201ENST00000602529 1483 ntBASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 LINC00896-202ENST00000609602 2128 ntBASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI2Q9Y5P3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 AC005332.8-201ENST00000622750 2735 ntBASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 AP001269.4-201ENST00000609611 512 ntBASIC17.73■□□□□ 0.43
RAI2Q9Y5P3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms