Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 AC020916.1-201ENST00000587762 1774 ntBASIC17.65■□□□□ 0.42
PKP3Q9Y446 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PKP3Q9Y446 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PKP3Q9Y446 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PKP3Q9Y446 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP3Q9Y446 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP3Q9Y446 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PKP3Q9Y446 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 AC002558.1-201ENST00000488906 803 ntBASIC17.64■□□□□ 0.41
PKP3Q9Y446 IGHV3-52-201ENST00000519770 353 ntBASIC17.64■□□□□ 0.41
PKP3Q9Y446 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 AC114341.1-201ENST00000618070 349 ntBASIC17.64■□□□□ 0.41
PKP3Q9Y446 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP3Q9Y446 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP3Q9Y446 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PKP3Q9Y446 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.64■□□□□ 0.41
PKP3Q9Y446 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 NUS1P2-201ENST00000417358 873 ntBASIC17.63■□□□□ 0.41
PKP3Q9Y446 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 AC138894.3-201ENST00000603787 634 ntBASIC17.63■□□□□ 0.41
PKP3Q9Y446 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP3Q9Y446 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PKP3Q9Y446 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
PKP3Q9Y446 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.62■□□□□ 0.41
PKP3Q9Y446 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.62■□□□□ 0.41
PKP3Q9Y446 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 SIRPAP1-201ENST00000448467 1770 ntBASIC17.62■□□□□ 0.41
PKP3Q9Y446 MYCLP1-201ENST00000372451 1075 ntBASIC17.62■□□□□ 0.41
PKP3Q9Y446 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PKP3Q9Y446 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.62■□□□□ 0.41
PKP3Q9Y446 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.62■□□□□ 0.41
PKP3Q9Y446 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.62■□□□□ 0.41
PKP3Q9Y446 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP3Q9Y446 AC111152.3-201ENST00000569699 673 ntBASIC17.62■□□□□ 0.41
PKP3Q9Y446 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.62■□□□□ 0.41
PKP3Q9Y446 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.62■□□□□ 0.41
PKP3Q9Y446 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms