Protein–RNA interactions for Protein: Q9Y241

HIGD1A, HIG1 domain family member 1A, mitochondrial, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1AQ9Y241 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIGD1AQ9Y241 AC010947.1-201ENST00000623454 693 ntBASIC13.71□□□□□ -0.21
HIGD1AQ9Y241 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
HIGD1AQ9Y241 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.71□□□□□ -0.21
HIGD1AQ9Y241 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.71□□□□□ -0.21
HIGD1AQ9Y241 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIGD1AQ9Y241 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIGD1AQ9Y241 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIGD1AQ9Y241 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIGD1AQ9Y241 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIGD1AQ9Y241 AC016396.2-201ENST00000562575 1417 ntBASIC13.71□□□□□ -0.22
HIGD1AQ9Y241 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIGD1AQ9Y241 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIGD1AQ9Y241 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIGD1AQ9Y241 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HIGD1AQ9Y241 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HIGD1AQ9Y241 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
HIGD1AQ9Y241 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.71□□□□□ -0.22
HIGD1AQ9Y241 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
HIGD1AQ9Y241 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIGD1AQ9Y241 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 AC124067.4-201ENST00000519691 2379 ntBASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 MMP23A-201ENST00000234610 1017 ntBASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 ECEL1P3-201ENST00000427961 737 ntBASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIGD1AQ9Y241 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
HIGD1AQ9Y241 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIGD1AQ9Y241 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIGD1AQ9Y241 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIGD1AQ9Y241 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
HIGD1AQ9Y241 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIGD1AQ9Y241 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIGD1AQ9Y241 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIGD1AQ9Y241 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIGD1AQ9Y241 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIGD1AQ9Y241 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms