Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS29Q9UBQ0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS29Q9UBQ0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS29Q9UBQ0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS29Q9UBQ0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS29Q9UBQ0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS29Q9UBQ0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.84■□□□□ 0.29
VPS29Q9UBQ0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
VPS29Q9UBQ0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS29Q9UBQ0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VPS29Q9UBQ0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS29Q9UBQ0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VPS29Q9UBQ0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VPS29Q9UBQ0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VPS29Q9UBQ0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
VPS29Q9UBQ0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 AL138831.2-201ENST00000606564 490 ntBASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS29Q9UBQ0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 AC005332.1-201ENST00000577698 1310 ntBASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 MYCLP1-201ENST00000372451 1075 ntBASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 AL845331.1-201ENST00000424978 1190 ntBASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 BX276092.5-203ENST00000456199 560 ntBASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 IGHV3-52-201ENST00000519770 353 ntBASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 NTF6B-201ENST00000591913 560 ntBASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 AL121672.3-201ENST00000608644 468 ntBASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VPS29Q9UBQ0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VPS29Q9UBQ0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS29Q9UBQ0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
VPS29Q9UBQ0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS29Q9UBQ0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VPS29Q9UBQ0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS29Q9UBQ0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS29Q9UBQ0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms