Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 MIR762-201ENST00000390236 83 ntBASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 AL391121.1-201ENST00000607967 1349 ntBASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 BEND3P1-201ENST00000421591 1944 ntBASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC8.95□□□□□ -0.98
CDC42SE1Q9NRR8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 DMBT1P1-203ENST00000636837 4628 ntBASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 AC060834.1-201ENST00000443027 2032 ntBASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 AC005915.1-201ENST00000624912 2018 ntBASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 AC006449.6-201ENST00000612330 2296 ntBASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 APP-205ENST00000358918 2366 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms