Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCP1Q9H5V8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.39■□□□□ 0.21
CDCP1Q9H5V8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
CDCP1Q9H5V8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCP1Q9H5V8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDCP1Q9H5V8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCP1Q9H5V8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.39■□□□□ 0.21
CDCP1Q9H5V8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.39■□□□□ 0.21
CDCP1Q9H5V8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDCP1Q9H5V8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCP1Q9H5V8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCP1Q9H5V8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 SCARNA2-201ENST00000458748 420 ntBASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 AC116407.2-201ENST00000613639 860 ntBASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 HLA-A-201ENST00000376802 1334 ntBASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCP1Q9H5V8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 AC100803.2-201ENST00000562459 1963 ntBASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 KRT18P67-201ENST00000432816 1264 ntBASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 AC122714.2-201ENST00000502787 707 ntBASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 RNPS1P1-201ENST00000507437 918 ntBASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 AC073648.2-201ENST00000510116 352 ntBASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 AL773604.1-201ENST00000617417 272 ntBASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.37■□□□□ 0.21
CDCP1Q9H5V8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.36■□□□□ 0.21
CDCP1Q9H5V8 PCDHA12-202ENST00000613593 2588 ntBASIC16.36■□□□□ 0.21
CDCP1Q9H5V8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.36■□□□□ 0.21
CDCP1Q9H5V8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.36■□□□□ 0.21
CDCP1Q9H5V8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms