Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 AC068880.1-201ENST00000507289 2297 ntBASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM62Q9BVG3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 AC064862.7-201ENST00000604520 867 ntBASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 RNF165-205ENST00000588679 2904 ntBASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 AC046185.3-201ENST00000623228 1824 ntBASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM62Q9BVG3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 EMBP1-201ENST00000458200 901 ntBASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 AF238378.1-201ENST00000526806 358 ntBASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 AL022326.1-202ENST00000641533 845 ntBASIC18.27■□□□□ 0.52
TRIM62Q9BVG3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM62Q9BVG3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM62Q9BVG3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM62Q9BVG3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
TRIM62Q9BVG3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM62Q9BVG3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms