Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NDUFAF3Q9BU61 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 AGGF1P2-201ENST00000426656 2106 ntBASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NDUFAF3Q9BU61 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 TMPOP1-202ENST00000424642 1267 ntBASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 AL390955.1-201ENST00000428694 934 ntBASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 AC010331.1-201ENST00000611423 582 ntBASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFAF3Q9BU61 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms