Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 AC080080.1-201ENST00000625121 2420 ntBASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 AC005332.1-201ENST00000577698 1310 ntBASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 GUSBP12-201ENST00000513727 720 ntBASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 AL136038.3-201ENST00000561909 1096 ntBASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF4Q9BSR8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 IGHV3-41-201ENST00000613121 348 ntBASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.53■□□□□ 0.24
YIPF4Q9BSR8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 CROCCP1-201ENST00000426910 5675 ntBASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 BX276092.7-203ENST00000637198 1536 ntBASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 AL592071.1-201ENST00000611956 408 ntBASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
YIPF4Q9BSR8 LINC01451-201ENST00000623792 534 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms