Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 WWOX-216ENST00000569818 525 ntBASIC13.44□□□□□ -0.26
LINC00479Q96M42 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 AC010240.3-201ENST00000607688 395 ntBASIC13.44□□□□□ -0.26
LINC00479Q96M42 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00479Q96M42 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00479Q96M42 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 RPPH1-201ENST00000516869 333 ntBASIC13.43□□□□□ -0.26
LINC00479Q96M42 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 KRT18P6-201ENST00000555540 1265 ntBASIC13.43□□□□□ -0.26
LINC00479Q96M42 AC016396.2-201ENST00000562575 1417 ntBASIC13.43□□□□□ -0.26
LINC00479Q96M42 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 AC046185.3-201ENST00000623228 1824 ntBASIC13.43□□□□□ -0.26
LINC00479Q96M42 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LINC00479Q96M42 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00479Q96M42 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 PCDHB17P-201ENST00000539533 2393 ntBASIC13.42□□□□□ -0.26
LINC00479Q96M42 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 AC128676.1-201ENST00000454392 318 ntBASIC13.42□□□□□ -0.26
LINC00479Q96M42 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00479Q96M42 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
LINC00479Q96M42 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms