Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC39Q96DD0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.73■□□□□ 0.43
LRRC39Q96DD0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC39Q96DD0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LRRC39Q96DD0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LRRC39Q96DD0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.72■□□□□ 0.43
LRRC39Q96DD0 KRT18P38-201ENST00000449496 1282 ntBASIC17.72■□□□□ 0.43
LRRC39Q96DD0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 HYMAI.1-201ENST00000620949 238 ntBASIC17.72■□□□□ 0.43
LRRC39Q96DD0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 AC133561.5-201ENST00000635547 218 ntBASIC17.72■□□□□ 0.43
LRRC39Q96DD0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 AC093525.9-201ENST00000624961 1746 ntBASIC17.72■□□□□ 0.43
LRRC39Q96DD0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC39Q96DD0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 SLC25A1P3-201ENST00000395415 828 ntBASIC17.71■□□□□ 0.43
LRRC39Q96DD0 AC112907.2-201ENST00000448639 330 ntBASIC17.71■□□□□ 0.43
LRRC39Q96DD0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 IGHV3-52-201ENST00000519770 353 ntBASIC17.71■□□□□ 0.43
LRRC39Q96DD0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 Z83836.1-201ENST00000624605 1642 ntBASIC17.71■□□□□ 0.43
LRRC39Q96DD0 AC106886.4-201ENST00000623557 2502 ntBASIC17.71■□□□□ 0.43
LRRC39Q96DD0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC39Q96DD0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC39Q96DD0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC39Q96DD0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.71■□□□□ 0.42
LRRC39Q96DD0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
LRRC39Q96DD0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.71■□□□□ 0.42
LRRC39Q96DD0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC39Q96DD0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms