Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 AC009533.2-201ENST00000543664 586 ntBASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 TPSP2-201ENST00000561760 610 ntBASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 AP000550.4-202ENST00000639755 178 ntBASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 AC233702.3-201ENST00000578656 1387 ntBASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 AL049757.1-201ENST00000616842 1596 ntBASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RHBDF1Q96CC6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RHBDF1Q96CC6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RHBDF1Q96CC6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RHBDF1Q96CC6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RHBDF1Q96CC6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
RHBDF1Q96CC6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
RHBDF1Q96CC6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RHBDF1Q96CC6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RHBDF1Q96CC6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
RHBDF1Q96CC6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.08■□□□□ 0.33
RHBDF1Q96CC6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.08■□□□□ 0.33
RHBDF1Q96CC6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 MYCLP1-201ENST00000372451 1075 ntBASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 AC103564.2-201ENST00000432853 1299 ntBASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 KRT18P35-201ENST00000510488 1269 ntBASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 IGHV3-52-201ENST00000519770 353 ntBASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 AP002414.4-201ENST00000589764 1148 ntBASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RHBDF1Q96CC6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RHBDF1Q96CC6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms