Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.5■□□□□ 0.07
AP3S1Q92572 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.5■□□□□ 0.07
AP3S1Q92572 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S1Q92572 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.5■□□□□ 0.07
AP3S1Q92572 NIFKP9-201ENST00000419265 221 ntBASIC15.5■□□□□ 0.07
AP3S1Q92572 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.5■□□□□ 0.07
AP3S1Q92572 DDX43P3-201ENST00000441064 443 ntBASIC15.5■□□□□ 0.07
AP3S1Q92572 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.5■□□□□ 0.07
AP3S1Q92572 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S1Q92572 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S1Q92572 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.5■□□□□ 0.07
AP3S1Q92572 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.5■□□□□ 0.07
AP3S1Q92572 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S1Q92572 AC087623.3-201ENST00000607047 1098 ntBASIC15.5■□□□□ 0.07
AP3S1Q92572 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S1Q92572 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.5■□□□□ 0.07
AP3S1Q92572 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AP3S1Q92572 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S1Q92572 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3S1Q92572 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3S1Q92572 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S1Q92572 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
AP3S1Q92572 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S1Q92572 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S1Q92572 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S1Q92572 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AP3S1Q92572 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.49■□□□□ 0.07
AP3S1Q92572 MIR663A-201ENST00000385250 93 ntBASIC15.49■□□□□ 0.07
AP3S1Q92572 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.49■□□□□ 0.07
AP3S1Q92572 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S1Q92572 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.49■□□□□ 0.07
AP3S1Q92572 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.49■□□□□ 0.07
AP3S1Q92572 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.49■□□□□ 0.07
AP3S1Q92572 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AP3S1Q92572 AC026271.3-201ENST00000571884 352 ntBASIC15.49■□□□□ 0.07
AP3S1Q92572 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S1Q92572 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.49■□□□□ 0.07
AP3S1Q92572 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
AP3S1Q92572 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.49■□□□□ 0.07
AP3S1Q92572 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
AP3S1Q92572 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S1Q92572 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.49■□□□□ 0.07
AP3S1Q92572 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S1Q92572 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3S1Q92572 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3S1Q92572 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S1Q92572 NORAD-201ENST00000565493 5339 ntBASIC15.48■□□□□ 0.07
AP3S1Q92572 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
AP3S1Q92572 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S1Q92572 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S1Q92572 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
AP3S1Q92572 AC126755.1-201ENST00000525846 6405 ntBASIC15.48■□□□□ 0.07
AP3S1Q92572 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S1Q92572 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.48■□□□□ 0.07
AP3S1Q92572 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S1Q92572 AC009949.1-201ENST00000623048 1830 ntBASIC15.48■□□□□ 0.07
AP3S1Q92572 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S1Q92572 AC007950.2-201ENST00000615045 2347 ntBASIC15.48■□□□□ 0.07
AP3S1Q92572 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.48■□□□□ 0.07
AP3S1Q92572 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S1Q92572 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S1Q92572 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S1Q92572 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3S1Q92572 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms