Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 AC022898.2-201ENST00000616822 1312 ntBASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 KRT8P7-201ENST00000533003 1432 ntBASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 HOXB1-202ENST00000577092 1414 ntBASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 AL359075.1-203ENST00000462729 1002 ntBASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40AQ8WXH6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
RAB40AQ8WXH6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.46■□□□□ 0.06
RAB40AQ8WXH6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40AQ8WXH6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40AQ8WXH6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40AQ8WXH6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RAB40AQ8WXH6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.46■□□□□ 0.06
RAB40AQ8WXH6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40AQ8WXH6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40AQ8WXH6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 AL031133.1-201ENST00000406807 723 ntBASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 AC106886.4-201ENST00000623557 2502 ntBASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RAB40AQ8WXH6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 STARP1-201ENST00000397973 869 ntBASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.44■□□□□ 0.06
RAB40AQ8WXH6 AC034232.1-201ENST00000506026 1064 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms