Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 MIR3652-201ENST00000579335 131 ntBASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 BNIP3P18-201ENST00000593976 575 ntBASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMGCLL1Q8TB92 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.21■□□□□ 0.34
HMGCLL1Q8TB92 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.21■□□□□ 0.34
HMGCLL1Q8TB92 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMGCLL1Q8TB92 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.21■□□□□ 0.34
HMGCLL1Q8TB92 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMGCLL1Q8TB92 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.21■□□□□ 0.34
HMGCLL1Q8TB92 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 MINOS1P3-201ENST00000457048 203 ntBASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 AC011467.2-201ENST00000598425 242 ntBASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLL1Q8TB92 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 COX5BP2-201ENST00000392354 334 ntBASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 AC007967.3-201ENST00000434308 558 ntBASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 AC009949.1-201ENST00000623048 1830 ntBASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCLL1Q8TB92 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.18■□□□□ 0.34
HMGCLL1Q8TB92 AGGF1P2-201ENST00000426656 2106 ntBASIC17.18■□□□□ 0.34
HMGCLL1Q8TB92 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCLL1Q8TB92 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLL1Q8TB92 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
HMGCLL1Q8TB92 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLL1Q8TB92 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGCLL1Q8TB92 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HMGCLL1Q8TB92 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLL1Q8TB92 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms