Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 AL691432.3-201ENST00000621860 400 ntBASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 AC084018.2-201ENST00000613093 2607 ntBASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 LINC01126-201ENST00000623515 1646 ntBASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CHMP1BQ7LBR1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 MINOS1P3-201ENST00000457048 203 ntBASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 KRT126P-201ENST00000549467 1181 ntBASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 AC074051.2-201ENST00000565115 352 ntBASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP1BQ7LBR1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 ESPNP-201ENST00000270691 2015 ntBASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 AL121772.3-201ENST00000610840 674 ntBASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 AC009154.2-201ENST00000621177 724 ntBASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 AC233702.3-201ENST00000578656 1387 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms