Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 KRT18P27-201ENST00000427733 1299 ntBASIC15.4■□□□□ 0.06
FREM1Q5H8C1 AP000347.1-202ENST00000435868 847 ntBASIC15.4■□□□□ 0.06
FREM1Q5H8C1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 AL049840.3-201ENST00000602669 611 ntBASIC15.4■□□□□ 0.06
FREM1Q5H8C1 AC073592.4-201ENST00000623827 446 ntBASIC15.4■□□□□ 0.06
FREM1Q5H8C1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FREM1Q5H8C1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.39■□□□□ 0.05
FREM1Q5H8C1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 AC025062.2-201ENST00000605477 670 ntBASIC15.39■□□□□ 0.05
FREM1Q5H8C1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 AP000867.4-201ENST00000641616 219 ntBASIC15.39■□□□□ 0.05
FREM1Q5H8C1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM1Q5H8C1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 RPL13AP23-201ENST00000480739 586 ntBASIC15.38■□□□□ 0.05
FREM1Q5H8C1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 AC107918.4-202ENST00000641623 219 ntBASIC15.38■□□□□ 0.05
FREM1Q5H8C1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
FREM1Q5H8C1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FREM1Q5H8C1 IGHV3-52-201ENST00000519770 353 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms