Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 AC233702.3-201ENST00000578656 1387 ntBASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 AP005901.3-202ENST00000581653 237 ntBASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 HLA-J-201ENST00000462773 1622 ntBASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HERC4Q5GLZ8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 COX5BP2-201ENST00000392354 334 ntBASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 AC007967.3-201ENST00000434308 558 ntBASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 TOB2P1-201ENST00000469761 992 ntBASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC4Q5GLZ8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 AC092865.5-201ENST00000545435 363 ntBASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HERC4Q5GLZ8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.59■□□□□ 0.73
HERC4Q5GLZ8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.59■□□□□ 0.73
HERC4Q5GLZ8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HERC4Q5GLZ8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
HERC4Q5GLZ8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HERC4Q5GLZ8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HERC4Q5GLZ8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HERC4Q5GLZ8 IL9RP2-201ENST00000423948 1312 ntBASIC19.59■□□□□ 0.73
HERC4Q5GLZ8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.59■□□□□ 0.73
HERC4Q5GLZ8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms