Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 RPS2P28-201ENST00000314255 741 ntBASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 AC021087.4-201ENST00000563761 564 ntBASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC178Q5BJE1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC178Q5BJE1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.52■□□□□ 0.87
CCDC178Q5BJE1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC178Q5BJE1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 MTDHP4-201ENST00000600287 670 ntBASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 AL773604.1-201ENST00000617417 272 ntBASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC178Q5BJE1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 FDX1P1-201ENST00000449115 551 ntBASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 AC018712.1-201ENST00000455767 687 ntBASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 BX005266.1-201ENST00000473402 457 ntBASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC178Q5BJE1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms