Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 TSEN15P1-201ENST00000423257 515 ntBASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 ACTL9-202ENST00000612068 1252 ntBASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 AC106028.4-201ENST00000614509 607 ntBASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 AC105339.1-204ENST00000636249 355 ntBASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM71Q2Q1W2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 PAWRP1-201ENST00000451083 565 ntBASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 AC068137.2-201ENST00000605408 478 ntBASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
TRIM71Q2Q1W2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM71Q2Q1W2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.02■□□□□ 0.63
TRIM71Q2Q1W2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM71Q2Q1W2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.02■□□□□ 0.63
TRIM71Q2Q1W2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.02■□□□□ 0.63
TRIM71Q2Q1W2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.02■□□□□ 0.63
TRIM71Q2Q1W2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM71Q2Q1W2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM71Q2Q1W2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.02■□□□□ 0.63
TRIM71Q2Q1W2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 AC004461.1-201ENST00000412461 403 ntBASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM71Q2Q1W2 AL135999.2-201ENST00000622438 1686 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms