Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP1S1P61966 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP1S1P61966 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP1S1P61966 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP1S1P61966 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP1S1P61966 PRYP5-201ENST00000451909 266 ntBASIC17.66■□□□□ 0.42
AP1S1P61966 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
AP1S1P61966 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.66■□□□□ 0.42
AP1S1P61966 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP1S1P61966 NKAPP1-205ENST00000585790 367 ntBASIC17.66■□□□□ 0.42
AP1S1P61966 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.66■□□□□ 0.42
AP1S1P61966 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.66■□□□□ 0.42
AP1S1P61966 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.66■□□□□ 0.42
AP1S1P61966 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP1S1P61966 AL022326.1-202ENST00000641533 845 ntBASIC17.66■□□□□ 0.42
AP1S1P61966 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
AP1S1P61966 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP1S1P61966 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.66■□□□□ 0.42
AP1S1P61966 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
AP1S1P61966 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
AP1S1P61966 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.66■□□□□ 0.42
AP1S1P61966 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.66■□□□□ 0.42
AP1S1P61966 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
AP1S1P61966 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP1S1P61966 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP1S1P61966 AC046185.3-201ENST00000623228 1824 ntBASIC17.65■□□□□ 0.42
AP1S1P61966 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.65■□□□□ 0.42
AP1S1P61966 LYSMD4-203ENST00000378904 2122 ntBASIC17.65■□□□□ 0.42
AP1S1P61966 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
AP1S1P61966 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
AP1S1P61966 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.65■□□□□ 0.42
AP1S1P61966 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
AP1S1P61966 SART3-203ENST00000546611 1184 ntBASIC17.65■□□□□ 0.42
AP1S1P61966 AL160237.2-201ENST00000556165 472 ntBASIC17.65■□□□□ 0.42
AP1S1P61966 AC104692.2-201ENST00000603054 253 ntBASIC17.65■□□□□ 0.42
AP1S1P61966 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.65■□□□□ 0.42
AP1S1P61966 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.65■□□□□ 0.42
AP1S1P61966 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 AL138688.1-201ENST00000624851 1594 ntBASIC17.65■□□□□ 0.42
AP1S1P61966 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.65■□□□□ 0.42
AP1S1P61966 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP1S1P61966 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP1S1P61966 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.64■□□□□ 0.42
AP1S1P61966 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
AP1S1P61966 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP1S1P61966 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP1S1P61966 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
AP1S1P61966 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
AP1S1P61966 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.64■□□□□ 0.41
AP1S1P61966 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.64■□□□□ 0.41
AP1S1P61966 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.64■□□□□ 0.41
AP1S1P61966 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.64■□□□□ 0.41
AP1S1P61966 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
AP1S1P61966 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.64■□□□□ 0.41
AP1S1P61966 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.64■□□□□ 0.41
AP1S1P61966 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 TP73-AS1-207ENST00000624167 988 ntBASIC17.64■□□□□ 0.41
AP1S1P61966 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
AP1S1P61966 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
AP1S1P61966 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.64■□□□□ 0.41
AP1S1P61966 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP1S1P61966 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S1P61966 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.63■□□□□ 0.41
AP1S1P61966 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms