Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN12P56749 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN12P56749 AC113410.3-201ENST00000623366 203 ntBASIC15.3■□□□□ 0.04
CLDN12P56749 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLDN12P56749 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN12P56749 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN12P56749 AC092338.2-201ENST00000568827 1415 ntBASIC15.29■□□□□ 0.04
CLDN12P56749 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CLDN12P56749 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN12P56749 SEC1P-202ENST00000473944 940 ntBASIC15.29■□□□□ 0.04
CLDN12P56749 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN12P56749 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN12P56749 AC024243.1-201ENST00000609234 778 ntBASIC15.29■□□□□ 0.04
CLDN12P56749 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLDN12P56749 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN12P56749 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.29■□□□□ 0.04
CLDN12P56749 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CLDN12P56749 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN12P56749 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN12P56749 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN12P56749 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN12P56749 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN12P56749 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN12P56749 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN12P56749 KRT8P47-201ENST00000604727 1398 ntBASIC15.28■□□□□ 0.04
CLDN12P56749 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN12P56749 ABHD17AP1-201ENST00000358206 933 ntBASIC15.28■□□□□ 0.04
CLDN12P56749 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN12P56749 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLDN12P56749 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CLDN12P56749 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 DDX43P3-201ENST00000441064 443 ntBASIC15.28■□□□□ 0.04
CLDN12P56749 AL355355.2-201ENST00000442321 338 ntBASIC15.28■□□□□ 0.04
CLDN12P56749 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN12P56749 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN12P56749 BX088651.1-201ENST00000540551 451 ntBASIC15.28■□□□□ 0.04
CLDN12P56749 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN12P56749 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN12P56749 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN12P56749 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN12P56749 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN12P56749 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CLDN12P56749 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN12P56749 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLDN12P56749 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN12P56749 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN12P56749 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN12P56749 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN12P56749 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN12P56749 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN12P56749 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms