Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.71■□□□□ 0.11
GFRA1P56159 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.71■□□□□ 0.11
GFRA1P56159 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.71■□□□□ 0.11
GFRA1P56159 AC105339.3-201ENST00000560043 636 ntBASIC15.71■□□□□ 0.11
GFRA1P56159 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.71■□□□□ 0.11
GFRA1P56159 AC006557.2-201ENST00000592985 1240 ntBASIC15.71■□□□□ 0.11
GFRA1P56159 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.71■□□□□ 0.11
GFRA1P56159 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA1P56159 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
GFRA1P56159 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.71■□□□□ 0.11
GFRA1P56159 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA1P56159 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA1P56159 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA1P56159 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA1P56159 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.71■□□□□ 0.11
GFRA1P56159 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA1P56159 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GFRA1P56159 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GFRA1P56159 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFRA1P56159 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFRA1P56159 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
GFRA1P56159 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFRA1P56159 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFRA1P56159 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.71■□□□□ 0.1
GFRA1P56159 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GFRA1P56159 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA1P56159 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA1P56159 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GFRA1P56159 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA1P56159 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA1P56159 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.7■□□□□ 0.1
GFRA1P56159 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA1P56159 AC133963.1-201ENST00000504166 1679 ntBASIC15.7■□□□□ 0.1
GFRA1P56159 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA1P56159 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.7■□□□□ 0.1
GFRA1P56159 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA1P56159 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA1P56159 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.7■□□□□ 0.1
GFRA1P56159 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.7■□□□□ 0.1
GFRA1P56159 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA1P56159 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.7■□□□□ 0.1
GFRA1P56159 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.7■□□□□ 0.1
GFRA1P56159 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA1P56159 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.7■□□□□ 0.1
GFRA1P56159 AC004706.3-202ENST00000621574 984 ntBASIC15.7■□□□□ 0.1
GFRA1P56159 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.7■□□□□ 0.1
GFRA1P56159 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA1P56159 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA1P56159 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA1P56159 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA1P56159 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA1P56159 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA1P56159 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA1P56159 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA1P56159 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GFRA1P56159 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA1P56159 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GFRA1P56159 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA1P56159 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA1P56159 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 AC046185.3-201ENST00000623228 1824 ntBASIC15.69■□□□□ 0.1
GFRA1P56159 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
GFRA1P56159 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA1P56159 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.69■□□□□ 0.1
GFRA1P56159 AC073621.1-201ENST00000392730 636 ntBASIC15.69■□□□□ 0.1
GFRA1P56159 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.69■□□□□ 0.1
GFRA1P56159 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.69■□□□□ 0.1
GFRA1P56159 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.69■□□□□ 0.1
GFRA1P56159 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA1P56159 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA1P56159 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.69■□□□□ 0.1
GFRA1P56159 IGHV3-22-201ENST00000520721 359 ntBASIC15.69■□□□□ 0.1
GFRA1P56159 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.69■□□□□ 0.1
GFRA1P56159 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.69■□□□□ 0.1
GFRA1P56159 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
GFRA1P56159 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
GFRA1P56159 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA1P56159 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA1P56159 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA1P56159 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA1P56159 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 AP002414.3-201ENST00000589352 1468 ntBASIC15.68■□□□□ 0.1
GFRA1P56159 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms