Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGA2P52926 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.03■□□□□ 0.16
HMGA2P52926 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.03■□□□□ 0.16
HMGA2P52926 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGA2P52926 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGA2P52926 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGA2P52926 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HMGA2P52926 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGA2P52926 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGA2P52926 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGA2P52926 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGA2P52926 AL353692.3-201ENST00000407031 1396 ntBASIC16.02■□□□□ 0.16
HMGA2P52926 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGA2P52926 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGA2P52926 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.02■□□□□ 0.16
HMGA2P52926 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
HMGA2P52926 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
HMGA2P52926 KRT18P22-201ENST00000402024 1347 ntBASIC16.02■□□□□ 0.16
HMGA2P52926 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HMGA2P52926 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGA2P52926 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
HMGA2P52926 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGA2P52926 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
HMGA2P52926 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGA2P52926 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGA2P52926 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGA2P52926 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGA2P52926 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGA2P52926 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGA2P52926 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGA2P52926 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGA2P52926 AP006294.2-201ENST00000641667 209 ntBASIC16.02■□□□□ 0.16
HMGA2P52926 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGA2P52926 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGA2P52926 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HMGA2P52926 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HMGA2P52926 AC138932.1-201ENST00000534164 6830 ntBASIC16.02■□□□□ 0.15
HMGA2P52926 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGA2P52926 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.02■□□□□ 0.15
HMGA2P52926 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HMGA2P52926 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HMGA2P52926 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGA2P52926 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
HMGA2P52926 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGA2P52926 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.02■□□□□ 0.15
HMGA2P52926 AC078925.2-201ENST00000624013 1973 ntBASIC16.02■□□□□ 0.15
HMGA2P52926 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HMGA2P52926 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HMGA2P52926 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 LINC01568-207ENST00000641790 1380 ntBASIC16.01■□□□□ 0.15
HMGA2P52926 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 AC010460.3-201ENST00000511359 1579 ntBASIC16.01■□□□□ 0.15
HMGA2P52926 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
HMGA2P52926 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGA2P52926 MIR662-201ENST00000384847 95 ntBASIC16.01■□□□□ 0.15
HMGA2P52926 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HMGA2P52926 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.01■□□□□ 0.15
HMGA2P52926 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGA2P52926 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGA2P52926 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGA2P52926 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGA2P52926 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGA2P52926 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGA2P52926 AC140113.3-201ENST00000605663 199 ntBASIC16.01■□□□□ 0.15
HMGA2P52926 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HMGA2P52926 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HMGA2P52926 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HMGA2P52926 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
HMGA2P52926 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
HMGA2P52926 DOC2GP-204ENST00000639052 2548 ntBASIC16.01■□□□□ 0.15
HMGA2P52926 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGA2P52926 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGA2P52926 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGA2P52926 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16■□□□□ 0.15
HMGA2P52926 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGA2P52926 RNF216P1-203ENST00000404404 2427 ntBASIC16■□□□□ 0.15
HMGA2P52926 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16■□□□□ 0.15
HMGA2P52926 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16■□□□□ 0.15
HMGA2P52926 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGA2P52926 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGA2P52926 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16■□□□□ 0.15
HMGA2P52926 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16■□□□□ 0.15
HMGA2P52926 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16■□□□□ 0.15
HMGA2P52926 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGA2P52926 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms