Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
ZNF140P52738 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ZNF140P52738 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.45■□□□□ 0.38
ZNF140P52738 SLC25A1P3-201ENST00000395415 828 ntBASIC17.45■□□□□ 0.38
ZNF140P52738 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF140P52738 ABCD1P5-201ENST00000445663 754 ntBASIC17.45■□□□□ 0.38
ZNF140P52738 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.45■□□□□ 0.38
ZNF140P52738 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ZNF140P52738 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF140P52738 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ZNF140P52738 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF140P52738 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF140P52738 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ZNF140P52738 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF140P52738 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ZNF140P52738 FZD10-202ENST00000539839 3282 ntBASIC17.44■□□□□ 0.38
ZNF140P52738 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ZNF140P52738 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF140P52738 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF140P52738 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ZNF140P52738 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
ZNF140P52738 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNF140P52738 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.44■□□□□ 0.38
ZNF140P52738 STK19B-204ENST00000512515 211 ntBASIC17.44■□□□□ 0.38
ZNF140P52738 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNF140P52738 AL732292.2-201ENST00000609649 430 ntBASIC17.44■□□□□ 0.38
ZNF140P52738 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF140P52738 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF140P52738 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ZNF140P52738 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ZNF140P52738 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
ZNF140P52738 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 TSPY19P-201ENST00000418461 509 ntBASIC17.43■□□□□ 0.38
ZNF140P52738 TSPY18P-201ENST00000441642 509 ntBASIC17.43■□□□□ 0.38
ZNF140P52738 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF140P52738 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF140P52738 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF140P52738 KRT18P31-201ENST00000506277 1292 ntBASIC17.43■□□□□ 0.38
ZNF140P52738 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF140P52738 PRELID1P1-202ENST00000567272 903 ntBASIC17.43■□□□□ 0.38
ZNF140P52738 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
ZNF140P52738 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF140P52738 CLEC4GP1-201ENST00000596555 870 ntBASIC17.43■□□□□ 0.38
ZNF140P52738 AP001269.4-201ENST00000609611 512 ntBASIC17.43■□□□□ 0.38
ZNF140P52738 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ZNF140P52738 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF140P52738 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF140P52738 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF140P52738 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ZNF140P52738 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF140P52738 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF140P52738 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF140P52738 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF140P52738 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF140P52738 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF140P52738 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms