Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HCFC1P51610 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.23■□□□□ 0.03
HCFC1P51610 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HCFC1P51610 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.23■□□□□ 0.03
HCFC1P51610 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.23■□□□□ 0.03
HCFC1P51610 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HCFC1P51610 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.23■□□□□ 0.03
HCFC1P51610 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.23■□□□□ 0.03
HCFC1P51610 FAM8A3P-201ENST00000427218 844 ntBASIC15.23■□□□□ 0.03
HCFC1P51610 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HCFC1P51610 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.23■□□□□ 0.03
HCFC1P51610 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
HCFC1P51610 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.23■□□□□ 0.03
HCFC1P51610 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HCFC1P51610 LETM1P2-201ENST00000597330 2178 ntBASIC15.23■□□□□ 0.03
HCFC1P51610 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.23■□□□□ 0.03
HCFC1P51610 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
HCFC1P51610 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HCFC1P51610 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.23■□□□□ 0.03
HCFC1P51610 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 AC100803.2-201ENST00000562459 1963 ntBASIC15.23■□□□□ 0.03
HCFC1P51610 AL096828.2-201ENST00000567259 1965 ntBASIC15.23■□□□□ 0.03
HCFC1P51610 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HCFC1P51610 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.23■□□□□ 0.03
HCFC1P51610 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HCFC1P51610 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 AC003669.1-201ENST00000334569 611 ntBASIC15.22■□□□□ 0.03
HCFC1P51610 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.22■□□□□ 0.03
HCFC1P51610 DDX43P3-201ENST00000441064 443 ntBASIC15.22■□□□□ 0.03
HCFC1P51610 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.22■□□□□ 0.03
HCFC1P51610 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.22■□□□□ 0.03
HCFC1P51610 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC1P51610 AC073592.3-201ENST00000625118 1834 ntBASIC15.22■□□□□ 0.03
HCFC1P51610 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.22■□□□□ 0.03
HCFC1P51610 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC1P51610 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HCFC1P51610 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC1P51610 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HCFC1P51610 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HCFC1P51610 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 MIR770-201ENST00000390219 98 ntBASIC15.22■□□□□ 0.03
HCFC1P51610 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.22■□□□□ 0.03
HCFC1P51610 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HCFC1P51610 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.22■□□□□ 0.03
HCFC1P51610 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.22■□□□□ 0.03
HCFC1P51610 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC1P51610 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.22■□□□□ 0.03
HCFC1P51610 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.22■□□□□ 0.03
HCFC1P51610 AC009949.1-201ENST00000623048 1830 ntBASIC15.22■□□□□ 0.03
HCFC1P51610 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC1P51610 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HCFC1P51610 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.21■□□□□ 0.03
HCFC1P51610 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.21■□□□□ 0.03
HCFC1P51610 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.21■□□□□ 0.03
HCFC1P51610 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 AL354751.1-201ENST00000412768 1863 ntBASIC15.21■□□□□ 0.03
HCFC1P51610 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.21■□□□□ 0.03
HCFC1P51610 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 COX20P2-201ENST00000452636 358 ntBASIC15.21■□□□□ 0.03
HCFC1P51610 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HCFC1P51610 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.21■□□□□ 0.03
HCFC1P51610 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.21■□□□□ 0.03
HCFC1P51610 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HCFC1P51610 AJ011932.1-201ENST00000621707 465 ntBASIC15.21■□□□□ 0.03
HCFC1P51610 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.21■□□□□ 0.03
HCFC1P51610 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
HCFC1P51610 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC1P51610 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HCFC1P51610 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HCFC1P51610 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms