Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC019129.2-201ENST00000609837 1235 ntBASIC19.63■□□□□ 0.73
CENPFP49454 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CENPFP49454 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.62■□□□□ 0.73
CENPFP49454 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.62■□□□□ 0.73
CENPFP49454 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.62■□□□□ 0.73
CENPFP49454 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.62■□□□□ 0.73
CENPFP49454 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 AC140878.1-201ENST00000565277 250 ntBASIC19.62■□□□□ 0.73
CENPFP49454 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.62■□□□□ 0.73
CENPFP49454 ACTL9-202ENST00000612068 1252 ntBASIC19.62■□□□□ 0.73
CENPFP49454 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.62■□□□□ 0.73
CENPFP49454 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CENPFP49454 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CENPFP49454 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.62■□□□□ 0.73
CENPFP49454 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CENPFP49454 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
CENPFP49454 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.62■□□□□ 0.73
CENPFP49454 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.62■□□□□ 0.73
CENPFP49454 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.62■□□□□ 0.73
CENPFP49454 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CENPFP49454 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.62■□□□□ 0.73
CENPFP49454 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPFP49454 PTCHD3P3-201ENST00000403073 906 ntBASIC19.61■□□□□ 0.73
CENPFP49454 AL592309.1-201ENST00000443127 649 ntBASIC19.61■□□□□ 0.73
CENPFP49454 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.61■□□□□ 0.73
CENPFP49454 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.61■□□□□ 0.73
CENPFP49454 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.61■□□□□ 0.73
CENPFP49454 AC135776.1-201ENST00000319817 2481 ntBASIC19.61■□□□□ 0.73
CENPFP49454 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.61■□□□□ 0.73
CENPFP49454 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.61■□□□□ 0.73
CENPFP49454 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.61■□□□□ 0.73
CENPFP49454 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.61■□□□□ 0.73
CENPFP49454 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.61■□□□□ 0.73
CENPFP49454 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.61■□□□□ 0.73
CENPFP49454 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.61■□□□□ 0.73
CENPFP49454 AL662799.1-202ENST00000614205 422 ntBASIC19.61■□□□□ 0.73
CENPFP49454 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.61■□□□□ 0.73
CENPFP49454 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPFP49454 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.6■□□□□ 0.73
CENPFP49454 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CENPFP49454 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CENPFP49454 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.6■□□□□ 0.73
CENPFP49454 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.6■□□□□ 0.73
CENPFP49454 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CENPFP49454 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.6■□□□□ 0.73
CENPFP49454 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.6■□□□□ 0.73
CENPFP49454 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.6■□□□□ 0.73
CENPFP49454 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CENPFP49454 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPFP49454 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPFP49454 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CENPFP49454 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.59■□□□□ 0.73
CENPFP49454 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.59■□□□□ 0.73
CENPFP49454 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.59■□□□□ 0.73
CENPFP49454 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPFP49454 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPFP49454 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPFP49454 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CENPFP49454 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.59■□□□□ 0.73
CENPFP49454 AC079776.1-201ENST00000401540 1152 ntBASIC19.59■□□□□ 0.73
CENPFP49454 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms