Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.66■□□□□ 0.42
MDH1P40925 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MDH1P40925 CDCA4P2-201ENST00000441182 718 ntBASIC17.66■□□□□ 0.42
MDH1P40925 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
MDH1P40925 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
MDH1P40925 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.66■□□□□ 0.42
MDH1P40925 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MDH1P40925 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
MDH1P40925 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 FER1L4-210ENST00000615531 5998 ntBASIC17.66■□□□□ 0.42
MDH1P40925 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.66■□□□□ 0.42
MDH1P40925 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MDH1P40925 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.66■□□□□ 0.42
MDH1P40925 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.65■□□□□ 0.42
MDH1P40925 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MDH1P40925 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MDH1P40925 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
MDH1P40925 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.65■□□□□ 0.42
MDH1P40925 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.65■□□□□ 0.42
MDH1P40925 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
MDH1P40925 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.65■□□□□ 0.42
MDH1P40925 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MDH1P40925 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.65■□□□□ 0.42
MDH1P40925 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MDH1P40925 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.65■□□□□ 0.42
MDH1P40925 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.65■□□□□ 0.42
MDH1P40925 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
MDH1P40925 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MDH1P40925 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MDH1P40925 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.65■□□□□ 0.42
MDH1P40925 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MDH1P40925 AC092364.2-201ENST00000596710 2692 ntBASIC17.65■□□□□ 0.42
MDH1P40925 LINC00167-201ENST00000530583 1419 ntBASIC17.64■□□□□ 0.42
MDH1P40925 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 TSPY26P-202ENST00000565928 3884 ntBASIC17.64■□□□□ 0.41
MDH1P40925 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.64■□□□□ 0.41
MDH1P40925 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MDH1P40925 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.64■□□□□ 0.41
MDH1P40925 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.64■□□□□ 0.41
MDH1P40925 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.64■□□□□ 0.41
MDH1P40925 KSR1P1-201ENST00000446298 240 ntBASIC17.64■□□□□ 0.41
MDH1P40925 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.64■□□□□ 0.41
MDH1P40925 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.64■□□□□ 0.41
MDH1P40925 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.64■□□□□ 0.41
MDH1P40925 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MDH1P40925 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.64■□□□□ 0.41
MDH1P40925 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.64■□□□□ 0.41
MDH1P40925 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.64■□□□□ 0.41
MDH1P40925 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.64■□□□□ 0.41
MDH1P40925 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.64■□□□□ 0.41
MDH1P40925 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MDH1P40925 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.64■□□□□ 0.41
MDH1P40925 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
MDH1P40925 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.63■□□□□ 0.41
MDH1P40925 AC104640.1-201ENST00000562617 2109 ntBASIC17.63■□□□□ 0.41
MDH1P40925 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms