Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC098831.1-202ENST00000438821 336 ntBASIC15.13■□□□□ 0.01
CD40P25942 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CD40P25942 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.13■□□□□ 0.01
CD40P25942 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.13■□□□□ 0.01
CD40P25942 IGHV3-22-201ENST00000520721 359 ntBASIC15.13■□□□□ 0.01
CD40P25942 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.13■□□□□ 0.01
CD40P25942 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.13■□□□□ 0.01
CD40P25942 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.13■□□□□ 0.01
CD40P25942 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.13■□□□□ 0.01
CD40P25942 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
CD40P25942 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.13■□□□□ 0.01
CD40P25942 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CD40P25942 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
CD40P25942 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD40P25942 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.13■□□□□ 0.01
CD40P25942 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CD40P25942 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
CD40P25942 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.12■□□□□ 0.01
CD40P25942 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CD40P25942 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 AC009336.1-201ENST00000608941 1553 ntBASIC15.12■□□□□ 0.01
CD40P25942 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.12■□□□□ 0.01
CD40P25942 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 MIR574-201ENST00000385209 96 ntBASIC15.12■□□□□ 0.01
CD40P25942 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.12■□□□□ 0.01
CD40P25942 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.12■□□□□ 0.01
CD40P25942 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.12■□□□□ 0.01
CD40P25942 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CD40P25942 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.12■□□□□ 0.01
CD40P25942 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.12■□□□□ 0.01
CD40P25942 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.12■□□□□ 0.01
CD40P25942 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.12■□□□□ 0.01
CD40P25942 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.12■□□□□ 0.01
CD40P25942 MIR1199-201ENST00000621445 119 ntBASIC15.12■□□□□ 0.01
CD40P25942 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CD40P25942 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.12■□□□□ 0.01
CD40P25942 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 AP002414.3-201ENST00000589352 1468 ntBASIC15.12■□□□□ 0.01
CD40P25942 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CD40P25942 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.12■□□□□ 0.01
CD40P25942 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.12■□□□□ 0.01
CD40P25942 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.12■□□□□ 0.01
CD40P25942 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CD40P25942 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CD40P25942 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.12■□□□□ 0.01
CD40P25942 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD40P25942 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CD40P25942 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CD40P25942 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CD40P25942 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 NCF1C-201ENST00000438382 1427 ntBASIC15.11■□□□□ 0.01
CD40P25942 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CD40P25942 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.11■□□□□ 0.01
CD40P25942 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.11■□□□□ 0.01
CD40P25942 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CD40P25942 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms