Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 BNIP3P18-201ENST00000593976 575 ntBASIC17.74■□□□□ 0.43
HLA-DPA1P20036 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 POM121L3P-201ENST00000419331 1163 ntBASIC17.73■□□□□ 0.43
HLA-DPA1P20036 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 AC096582.2-201ENST00000510860 516 ntBASIC17.73■□□□□ 0.43
HLA-DPA1P20036 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 AL139327.4-201ENST00000612362 153 ntBASIC17.73■□□□□ 0.43
HLA-DPA1P20036 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HLA-DPA1P20036 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 SIRPAP1-201ENST00000448467 1770 ntBASIC17.72■□□□□ 0.43
HLA-DPA1P20036 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 AC111152.3-201ENST00000569699 673 ntBASIC17.72■□□□□ 0.43
HLA-DPA1P20036 AC109462.3-201ENST00000573934 613 ntBASIC17.72■□□□□ 0.43
HLA-DPA1P20036 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 AC114341.1-201ENST00000618070 349 ntBASIC17.72■□□□□ 0.43
HLA-DPA1P20036 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DPA1P20036 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 AL049757.1-201ENST00000616842 1596 ntBASIC17.71■□□□□ 0.43
HLA-DPA1P20036 LYSMD4-203ENST00000378904 2122 ntBASIC17.71■□□□□ 0.43
HLA-DPA1P20036 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms