Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN2P17655 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN2P17655 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.22■□□□□ 0.83
CAPN2P17655 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.22■□□□□ 0.83
CAPN2P17655 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN2P17655 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.21■□□□□ 0.83
CAPN2P17655 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.21■□□□□ 0.83
CAPN2P17655 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.21■□□□□ 0.83
CAPN2P17655 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CAPN2P17655 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.21■□□□□ 0.83
CAPN2P17655 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.21■□□□□ 0.83
CAPN2P17655 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.21■□□□□ 0.83
CAPN2P17655 AL035633.1-201ENST00000406139 838 ntBASIC20.21■□□□□ 0.83
CAPN2P17655 KRT18P27-201ENST00000427733 1299 ntBASIC20.21■□□□□ 0.83
CAPN2P17655 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CAPN2P17655 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.21■□□□□ 0.83
CAPN2P17655 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.21■□□□□ 0.83
CAPN2P17655 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
CAPN2P17655 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.21■□□□□ 0.83
CAPN2P17655 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CAPN2P17655 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN2P17655 AL357033.4-201ENST00000617703 1807 ntBASIC20.2■□□□□ 0.82
CAPN2P17655 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN2P17655 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.2■□□□□ 0.82
CAPN2P17655 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN2P17655 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN2P17655 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN2P17655 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN2P17655 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN2P17655 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN2P17655 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CAPN2P17655 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN2P17655 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.2■□□□□ 0.82
CAPN2P17655 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.2■□□□□ 0.82
CAPN2P17655 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN2P17655 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.2■□□□□ 0.82
CAPN2P17655 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN2P17655 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN2P17655 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.2■□□□□ 0.82
CAPN2P17655 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CAPN2P17655 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.2■□□□□ 0.82
CAPN2P17655 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.2■□□□□ 0.82
CAPN2P17655 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.2■□□□□ 0.82
CAPN2P17655 MIR4469-201ENST00000583919 79 ntBASIC20.2■□□□□ 0.82
CAPN2P17655 AL022326.1-202ENST00000641533 845 ntBASIC20.2■□□□□ 0.82
CAPN2P17655 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN2P17655 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CAPN2P17655 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CAPN2P17655 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN2P17655 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN2P17655 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN2P17655 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN2P17655 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CAPN2P17655 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN2P17655 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN2P17655 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN2P17655 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CAPN2P17655 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CAPN2P17655 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN2P17655 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CAPN2P17655 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN2P17655 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN2P17655 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN2P17655 SPCS2P1-201ENST00000561636 679 ntBASIC20.19■□□□□ 0.82
CAPN2P17655 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPN2P17655 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN2P17655 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CAPN2P17655 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPN2P17655 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN2P17655 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CAPN2P17655 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN2P17655 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN2P17655 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN2P17655 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPN2P17655 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN2P17655 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN2P17655 AL391005.1-201ENST00000623953 2435 ntBASIC20.18■□□□□ 0.82
CAPN2P17655 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN2P17655 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN2P17655 AL354751.1-201ENST00000412768 1863 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms