Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.62■□□□□ 0.25
NCK1P16333 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NCK1P16333 UNC93B2-201ENST00000285383 730 ntBASIC16.62■□□□□ 0.25
NCK1P16333 AC009947.2-201ENST00000444014 672 ntBASIC16.62■□□□□ 0.25
NCK1P16333 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.62■□□□□ 0.25
NCK1P16333 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.62■□□□□ 0.25
NCK1P16333 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.62■□□□□ 0.25
NCK1P16333 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.62■□□□□ 0.25
NCK1P16333 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.62■□□□□ 0.25
NCK1P16333 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
NCK1P16333 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 AC016396.2-201ENST00000562575 1417 ntBASIC16.62■□□□□ 0.25
NCK1P16333 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
NCK1P16333 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.61■□□□□ 0.25
NCK1P16333 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.61■□□□□ 0.25
NCK1P16333 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 AC046185.3-201ENST00000623228 1824 ntBASIC16.61■□□□□ 0.25
NCK1P16333 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.61■□□□□ 0.25
NCK1P16333 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.61■□□□□ 0.25
NCK1P16333 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
NCK1P16333 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NCK1P16333 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NCK1P16333 INGX-201ENST00000359239 846 ntBASIC16.61■□□□□ 0.25
NCK1P16333 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NCK1P16333 FAM201B-201ENST00000458407 597 ntBASIC16.61■□□□□ 0.25
NCK1P16333 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.61■□□□□ 0.25
NCK1P16333 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
NCK1P16333 MIR3917-201ENST00000580971 93 ntBASIC16.61■□□□□ 0.25
NCK1P16333 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NCK1P16333 ITM2C-210ENST00000620962 501 ntBASIC16.61■□□□□ 0.25
NCK1P16333 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.61■□□□□ 0.25
NCK1P16333 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.61■□□□□ 0.25
NCK1P16333 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NCK1P16333 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NCK1P16333 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCK1P16333 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.61■□□□□ 0.25
NCK1P16333 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
NCK1P16333 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NCK1P16333 AL158047.1-201ENST00000445918 881 ntBASIC16.6■□□□□ 0.25
NCK1P16333 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.6■□□□□ 0.25
NCK1P16333 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.6■□□□□ 0.25
NCK1P16333 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.6■□□□□ 0.25
NCK1P16333 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.6■□□□□ 0.25
NCK1P16333 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NCK1P16333 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.6■□□□□ 0.25
NCK1P16333 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NCK1P16333 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NCK1P16333 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms