Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PF4V1P10720 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PF4V1P10720 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
PF4V1P10720 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 AKR1C7P-201ENST00000305623 895 ntBASIC13.94□□□□□ -0.18
PF4V1P10720 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PF4V1P10720 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PF4V1P10720 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.94□□□□□ -0.18
PF4V1P10720 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PF4V1P10720 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.94□□□□□ -0.18
PF4V1P10720 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.94□□□□□ -0.18
PF4V1P10720 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.94□□□□□ -0.18
PF4V1P10720 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.94□□□□□ -0.18
PF4V1P10720 AP001005.1-201ENST00000571755 1248 ntBASIC13.94□□□□□ -0.18
PF4V1P10720 MIR5100-201ENST00000579544 119 ntBASIC13.94□□□□□ -0.18
PF4V1P10720 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.94□□□□□ -0.18
PF4V1P10720 BNIP3P18-201ENST00000593976 575 ntBASIC13.94□□□□□ -0.18
PF4V1P10720 AC008608.2-201ENST00000606089 416 ntBASIC13.94□□□□□ -0.18
PF4V1P10720 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PF4V1P10720 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PF4V1P10720 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PF4V1P10720 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.94□□□□□ -0.18
PF4V1P10720 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.94□□□□□ -0.18
PF4V1P10720 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.94□□□□□ -0.18
PF4V1P10720 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PF4V1P10720 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PF4V1P10720 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.93□□□□□ -0.18
PF4V1P10720 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
PF4V1P10720 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.93□□□□□ -0.18
PF4V1P10720 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.93□□□□□ -0.18
PF4V1P10720 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PF4V1P10720 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.93□□□□□ -0.18
PF4V1P10720 AP000347.1-202ENST00000435868 847 ntBASIC13.93□□□□□ -0.18
PF4V1P10720 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.93□□□□□ -0.18
PF4V1P10720 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.93□□□□□ -0.18
PF4V1P10720 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.93□□□□□ -0.18
PF4V1P10720 AL773604.1-201ENST00000617417 272 ntBASIC13.93□□□□□ -0.18
PF4V1P10720 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.93□□□□□ -0.18
PF4V1P10720 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PF4V1P10720 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
PF4V1P10720 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 AC018470.1-201ENST00000624790 3129 ntBASIC13.93□□□□□ -0.18
PF4V1P10720 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.93□□□□□ -0.18
PF4V1P10720 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 KRT8P47-201ENST00000604727 1398 ntBASIC13.93□□□□□ -0.18
PF4V1P10720 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.93□□□□□ -0.18
PF4V1P10720 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.93□□□□□ -0.18
PF4V1P10720 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.93□□□□□ -0.18
PF4V1P10720 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PF4V1P10720 AC100803.2-201ENST00000562459 1963 ntBASIC13.92□□□□□ -0.18
PF4V1P10720 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PF4V1P10720 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PF4V1P10720 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PF4V1P10720 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PF4V1P10720 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PF4V1P10720 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PF4V1P10720 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PF4V1P10720 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PF4V1P10720 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms