Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 AL049757.1-201ENST00000616842 1596 ntBASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB40ALP0C0E4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 AC005593.1-201ENST00000624894 515 ntBASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB40ALP0C0E4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 AC003669.1-201ENST00000334569 611 ntBASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 DDX43P3-201ENST00000441064 443 ntBASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40ALP0C0E4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB40ALP0C0E4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms