Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.64■□□□□ 0.42
MMP2P08253 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MMP2P08253 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MMP2P08253 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.64■□□□□ 0.42
MMP2P08253 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
MMP2P08253 FZD10-202ENST00000539839 3282 ntBASIC17.64■□□□□ 0.42
MMP2P08253 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP2P08253 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP2P08253 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP2P08253 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
MMP2P08253 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP2P08253 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP2P08253 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.64■□□□□ 0.41
MMP2P08253 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 REXO1L6P-202ENST00000619970 1078 ntBASIC17.64■□□□□ 0.41
MMP2P08253 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
MMP2P08253 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.64■□□□□ 0.41
MMP2P08253 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 AC079776.2-201ENST00000641154 1609 ntBASIC17.64■□□□□ 0.41
MMP2P08253 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP2P08253 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
MMP2P08253 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP2P08253 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MMP2P08253 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 SIGLEC16-201ENST00000599858 1437 ntBASIC17.64■□□□□ 0.41
MMP2P08253 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP2P08253 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MMP2P08253 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.63■□□□□ 0.41
MMP2P08253 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP2P08253 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP2P08253 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 IFNL4P1-201ENST00000607083 540 ntBASIC17.63■□□□□ 0.41
MMP2P08253 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 AL135999.2-201ENST00000622438 1686 ntBASIC17.63■□□□□ 0.41
MMP2P08253 AC116353.5-201ENST00000638148 1699 ntBASIC17.63■□□□□ 0.41
MMP2P08253 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MMP2P08253 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP2P08253 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP2P08253 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP2P08253 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
MMP2P08253 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP2P08253 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MMP2P08253 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
MMP2P08253 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MMP2P08253 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MMP2P08253 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.63■□□□□ 0.41
MMP2P08253 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP2P08253 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
MMP2P08253 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MMP2P08253 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MMP2P08253 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MMP2P08253 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.62■□□□□ 0.41
MMP2P08253 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP2P08253 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP2P08253 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MMP2P08253 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP2P08253 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP2P08253 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms