Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.7■□□□□ 0.42
RETP07949 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RETP07949 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.7■□□□□ 0.42
RETP07949 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RETP07949 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RETP07949 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.7■□□□□ 0.42
RETP07949 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.69■□□□□ 0.42
RETP07949 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RETP07949 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.69■□□□□ 0.42
RETP07949 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.69■□□□□ 0.42
RETP07949 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.69■□□□□ 0.42
RETP07949 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.69■□□□□ 0.42
RETP07949 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.69■□□□□ 0.42
RETP07949 PRYP5-201ENST00000451909 266 ntBASIC17.69■□□□□ 0.42
RETP07949 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RETP07949 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.69■□□□□ 0.42
RETP07949 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RETP07949 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.69■□□□□ 0.42
RETP07949 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.69■□□□□ 0.42
RETP07949 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RETP07949 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RETP07949 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RETP07949 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.68■□□□□ 0.42
RETP07949 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.68■□□□□ 0.42
RETP07949 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RETP07949 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RETP07949 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RETP07949 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RETP07949 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.68■□□□□ 0.42
RETP07949 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.68■□□□□ 0.42
RETP07949 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RETP07949 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RETP07949 BCRP1-201ENST00000444246 691 ntBASIC17.68■□□□□ 0.42
RETP07949 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.68■□□□□ 0.42
RETP07949 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RETP07949 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.68■□□□□ 0.42
RETP07949 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.68■□□□□ 0.42
RETP07949 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RETP07949 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.68■□□□□ 0.42
RETP07949 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RETP07949 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.68■□□□□ 0.42
RETP07949 AL078644.1-201ENST00000609881 752 ntBASIC17.68■□□□□ 0.42
RETP07949 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RETP07949 LINC00602-201ENST00000629776 2065 ntBASIC17.68■□□□□ 0.42
RETP07949 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RETP07949 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RETP07949 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RETP07949 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RETP07949 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RETP07949 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.67■□□□□ 0.42
RETP07949 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RETP07949 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.67■□□□□ 0.42
RETP07949 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 AL024508.2-201ENST00000607749 1894 ntBASIC17.67■□□□□ 0.42
RETP07949 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.67■□□□□ 0.42
RETP07949 AC008764.6-201ENST00000595909 2069 ntBASIC17.67■□□□□ 0.42
RETP07949 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.67■□□□□ 0.42
RETP07949 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.67■□□□□ 0.42
RETP07949 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.67■□□□□ 0.42
RETP07949 AC092474.2-201ENST00000424288 719 ntBASIC17.67■□□□□ 0.42
RETP07949 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.67■□□□□ 0.42
RETP07949 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.67■□□□□ 0.42
RETP07949 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RETP07949 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RETP07949 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 AC073592.4-201ENST00000623827 446 ntBASIC17.67■□□□□ 0.42
RETP07949 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.67■□□□□ 0.42
RETP07949 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.67■□□□□ 0.42
RETP07949 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RETP07949 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms