Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
APOA4P06727 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.63■□□□□ 0.41
APOA4P06727 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.63■□□□□ 0.41
APOA4P06727 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.63■□□□□ 0.41
APOA4P06727 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.63■□□□□ 0.41
APOA4P06727 AC090616.6-201ENST00000582640 721 ntBASIC17.63■□□□□ 0.41
APOA4P06727 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.63■□□□□ 0.41
APOA4P06727 AL121672.3-201ENST00000608644 468 ntBASIC17.63■□□□□ 0.41
APOA4P06727 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOA4P06727 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
APOA4P06727 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.63■□□□□ 0.41
APOA4P06727 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOA4P06727 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
APOA4P06727 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APOA4P06727 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOA4P06727 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOA4P06727 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.63■□□□□ 0.41
APOA4P06727 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.63■□□□□ 0.41
APOA4P06727 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.63■□□□□ 0.41
APOA4P06727 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APOA4P06727 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
APOA4P06727 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APOA4P06727 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APOA4P06727 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.62■□□□□ 0.41
APOA4P06727 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.62■□□□□ 0.41
APOA4P06727 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.62■□□□□ 0.41
APOA4P06727 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
APOA4P06727 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
APOA4P06727 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.62■□□□□ 0.41
APOA4P06727 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
APOA4P06727 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.62■□□□□ 0.41
APOA4P06727 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.62■□□□□ 0.41
APOA4P06727 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.62■□□□□ 0.41
APOA4P06727 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 AP000550.4-202ENST00000639755 178 ntBASIC17.62■□□□□ 0.41
APOA4P06727 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.62■□□□□ 0.41
APOA4P06727 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 AC009949.1-201ENST00000623048 1830 ntBASIC17.62■□□□□ 0.41
APOA4P06727 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.62■□□□□ 0.41
APOA4P06727 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.62■□□□□ 0.41
APOA4P06727 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
APOA4P06727 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.62■□□□□ 0.41
APOA4P06727 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOA4P06727 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
APOA4P06727 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
APOA4P06727 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
APOA4P06727 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.61■□□□□ 0.41
APOA4P06727 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 MTCL1P1-201ENST00000446207 792 ntBASIC17.61■□□□□ 0.41
APOA4P06727 AC068472.1-201ENST00000474589 881 ntBASIC17.61■□□□□ 0.41
APOA4P06727 AC112698.1-201ENST00000510299 916 ntBASIC17.61■□□□□ 0.41
APOA4P06727 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.61■□□□□ 0.41
APOA4P06727 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.61■□□□□ 0.41
APOA4P06727 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.61■□□□□ 0.41
APOA4P06727 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.61■□□□□ 0.41
APOA4P06727 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
APOA4P06727 AC091076.1-201ENST00000610741 619 ntBASIC17.61■□□□□ 0.41
APOA4P06727 IGHV3-41-201ENST00000613121 348 ntBASIC17.61■□□□□ 0.41
APOA4P06727 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.61■□□□□ 0.41
APOA4P06727 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.61■□□□□ 0.41
APOA4P06727 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
APOA4P06727 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.61■□□□□ 0.41
APOA4P06727 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
APOA4P06727 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APOA4P06727 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
APOA4P06727 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
APOA4P06727 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.6■□□□□ 0.41
APOA4P06727 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOA4P06727 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms