Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPNS1P04632 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPNS1P04632 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPNS1P04632 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPNS1P04632 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPNS1P04632 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPNS1P04632 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 KRT8P3-201ENST00000519669 1449 ntBASIC17.48■□□□□ 0.39
CAPNS1P04632 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPNS1P04632 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPNS1P04632 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPNS1P04632 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPNS1P04632 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPNS1P04632 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.48■□□□□ 0.39
CAPNS1P04632 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.48■□□□□ 0.39
CAPNS1P04632 KRT18P3-201ENST00000451602 1288 ntBASIC17.48■□□□□ 0.39
CAPNS1P04632 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPNS1P04632 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.48■□□□□ 0.39
CAPNS1P04632 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPNS1P04632 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CAPNS1P04632 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.48■□□□□ 0.39
CAPNS1P04632 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPNS1P04632 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CAPNS1P04632 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPNS1P04632 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPNS1P04632 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPNS1P04632 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPNS1P04632 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPNS1P04632 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPNS1P04632 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CAPNS1P04632 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPNS1P04632 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CAPNS1P04632 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CAPNS1P04632 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CAPNS1P04632 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 AC004832.2-201ENST00000426397 482 ntBASIC17.47■□□□□ 0.39
CAPNS1P04632 CYMP-203ENST00000474680 1263 ntBASIC17.47■□□□□ 0.39
CAPNS1P04632 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPNS1P04632 RFPL4AP1-201ENST00000530883 850 ntBASIC17.47■□□□□ 0.39
CAPNS1P04632 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.47■□□□□ 0.39
CAPNS1P04632 AC040169.1-201ENST00000565382 521 ntBASIC17.47■□□□□ 0.39
CAPNS1P04632 AC011840.4-201ENST00000578471 627 ntBASIC17.47■□□□□ 0.39
CAPNS1P04632 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPNS1P04632 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPNS1P04632 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPNS1P04632 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPNS1P04632 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPNS1P04632 KRT18P28-201ENST00000453838 1332 ntBASIC17.47■□□□□ 0.39
CAPNS1P04632 AC106820.2-201ENST00000563775 3264 ntBASIC17.46■□□□□ 0.39
CAPNS1P04632 NKILA-202ENST00000614771 2598 ntBASIC17.46■□□□□ 0.39
CAPNS1P04632 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPNS1P04632 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPNS1P04632 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.46■□□□□ 0.39
CAPNS1P04632 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPNS1P04632 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPNS1P04632 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.46■□□□□ 0.39
CAPNS1P04632 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPNS1P04632 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.46■□□□□ 0.39
CAPNS1P04632 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CAPNS1P04632 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPNS1P04632 AC008556.1-201ENST00000610908 2040 ntBASIC17.46■□□□□ 0.39
CAPNS1P04632 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPNS1P04632 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.46■□□□□ 0.39
CAPNS1P04632 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPNS1P04632 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPNS1P04632 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CAPNS1P04632 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.46■□□□□ 0.39
CAPNS1P04632 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPNS1P04632 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPNS1P04632 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPNS1P04632 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms