Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TUBB4AP04350 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TUBB4AP04350 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBB4AP04350 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBB4AP04350 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBB4AP04350 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.83■□□□□ 0.61
TUBB4AP04350 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBB4AP04350 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
TUBB4AP04350 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TUBB4AP04350 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBB4AP04350 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.83■□□□□ 0.61
TUBB4AP04350 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.83■□□□□ 0.6
TUBB4AP04350 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
TUBB4AP04350 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBB4AP04350 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TUBB4AP04350 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBB4AP04350 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBB4AP04350 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.83■□□□□ 0.6
TUBB4AP04350 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.83■□□□□ 0.6
TUBB4AP04350 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.83■□□□□ 0.6
TUBB4AP04350 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.83■□□□□ 0.6
TUBB4AP04350 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.83■□□□□ 0.6
TUBB4AP04350 AC110285.5-201ENST00000611501 352 ntBASIC18.83■□□□□ 0.6
TUBB4AP04350 AL139327.4-201ENST00000612362 153 ntBASIC18.83■□□□□ 0.6
TUBB4AP04350 AL023875.1-201ENST00000640777 796 ntBASIC18.83■□□□□ 0.6
TUBB4AP04350 AC008741.2-201ENST00000612792 3115 ntBASIC18.83■□□□□ 0.6
TUBB4AP04350 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBB4AP04350 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TUBB4AP04350 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.83■□□□□ 0.6
TUBB4AP04350 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBB4AP04350 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBB4AP04350 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBB4AP04350 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBB4AP04350 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.83■□□□□ 0.6
TUBB4AP04350 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBB4AP04350 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBB4AP04350 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.82■□□□□ 0.6
TUBB4AP04350 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
TUBB4AP04350 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBB4AP04350 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBB4AP04350 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TUBB4AP04350 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBB4AP04350 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBB4AP04350 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TUBB4AP04350 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBB4AP04350 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.82■□□□□ 0.6
TUBB4AP04350 CR392000.1-201ENST00000624770 1228 ntBASIC18.82■□□□□ 0.6
TUBB4AP04350 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBB4AP04350 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBB4AP04350 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
TUBB4AP04350 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TUBB4AP04350 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBB4AP04350 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBB4AP04350 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBB4AP04350 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TUBB4AP04350 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBB4AP04350 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TUBB4AP04350 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
TUBB4AP04350 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBB4AP04350 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.81■□□□□ 0.6
TUBB4AP04350 FAM201B-201ENST00000458407 597 ntBASIC18.81■□□□□ 0.6
TUBB4AP04350 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBB4AP04350 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.81■□□□□ 0.6
TUBB4AP04350 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TUBB4AP04350 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBB4AP04350 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBB4AP04350 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TUBB4AP04350 MIR4674-201ENST00000582457 87 ntBASIC18.81■□□□□ 0.6
TUBB4AP04350 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBB4AP04350 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms