Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB2O95900 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB2O95900 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.39■□□□□ 0.53
TRUB2O95900 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB2O95900 AC132008.2-207ENST00000454517 770 ntBASIC18.39■□□□□ 0.53
TRUB2O95900 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.39■□□□□ 0.53
TRUB2O95900 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.39■□□□□ 0.53
TRUB2O95900 AC111152.3-201ENST00000569699 673 ntBASIC18.39■□□□□ 0.53
TRUB2O95900 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.39■□□□□ 0.53
TRUB2O95900 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.39■□□□□ 0.53
TRUB2O95900 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB2O95900 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.39■□□□□ 0.53
TRUB2O95900 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB2O95900 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB2O95900 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRUB2O95900 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRUB2O95900 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.39■□□□□ 0.53
TRUB2O95900 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRUB2O95900 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRUB2O95900 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TRUB2O95900 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.38■□□□□ 0.53
TRUB2O95900 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.38■□□□□ 0.53
TRUB2O95900 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.38■□□□□ 0.53
TRUB2O95900 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.38■□□□□ 0.53
TRUB2O95900 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.38■□□□□ 0.53
TRUB2O95900 LINC01711-201ENST00000598340 967 ntBASIC18.38■□□□□ 0.53
TRUB2O95900 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.38■□□□□ 0.53
TRUB2O95900 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRUB2O95900 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRUB2O95900 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.38■□□□□ 0.53
TRUB2O95900 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.38■□□□□ 0.53
TRUB2O95900 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TRUB2O95900 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRUB2O95900 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.38■□□□□ 0.53
TRUB2O95900 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRUB2O95900 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.37■□□□□ 0.53
TRUB2O95900 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRUB2O95900 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.37■□□□□ 0.53
TRUB2O95900 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.37■□□□□ 0.53
TRUB2O95900 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRUB2O95900 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.37■□□□□ 0.53
TRUB2O95900 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.37■□□□□ 0.53
TRUB2O95900 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.37■□□□□ 0.53
TRUB2O95900 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.37■□□□□ 0.53
TRUB2O95900 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.37■□□□□ 0.53
TRUB2O95900 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.37■□□□□ 0.53
TRUB2O95900 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
TRUB2O95900 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.37■□□□□ 0.53
TRUB2O95900 AC019129.2-201ENST00000609837 1235 ntBASIC18.37■□□□□ 0.53
TRUB2O95900 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRUB2O95900 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRUB2O95900 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms