Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
LTN1O94822 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC23.03■■□□□ 1.28
LTN1O94822 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.03■■□□□ 1.28
LTN1O94822 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LTN1O94822 PODN-203ENST00000395871 2744 ntTSL 5 BASIC23.03■■□□□ 1.28
LTN1O94822 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LTN1O94822 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
LTN1O94822 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LTN1O94822 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.03■■□□□ 1.28
LTN1O94822 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC23.03■■□□□ 1.28
LTN1O94822 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
LTN1O94822 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC23.02■■□□□ 1.28
LTN1O94822 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LTN1O94822 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LTN1O94822 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC23.02■■□□□ 1.28
LTN1O94822 BCRP1-201ENST00000444246 691 ntBASIC23.02■■□□□ 1.28
LTN1O94822 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC23.02■■□□□ 1.28
LTN1O94822 CFL1-212ENST00000531413 636 ntTSL 3 BASIC23.02■■□□□ 1.28
LTN1O94822 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
LTN1O94822 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC23.02■■□□□ 1.28
LTN1O94822 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC23.02■■□□□ 1.28
LTN1O94822 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC23.02■■□□□ 1.28
LTN1O94822 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LTN1O94822 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
LTN1O94822 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC23.02■■□□□ 1.28
LTN1O94822 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LTN1O94822 AC004835.2-201ENST00000603762 682 ntBASIC23.01■■□□□ 1.27
LTN1O94822 AL139327.4-201ENST00000612362 153 ntBASIC23.01■■□□□ 1.27
LTN1O94822 LINC01451-201ENST00000623792 534 ntBASIC23.01■■□□□ 1.27
LTN1O94822 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC23.01■■□□□ 1.27
LTN1O94822 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC23.01■■□□□ 1.27
LTN1O94822 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LTN1O94822 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
LTN1O94822 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC23.01■■□□□ 1.27
LTN1O94822 AC009113.1-201ENST00000570267 2443 ntBASIC23.01■■□□□ 1.27
LTN1O94822 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LTN1O94822 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LTN1O94822 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
LTN1O94822 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LTN1O94822 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC23.01■■□□□ 1.27
LTN1O94822 LHX6-205ENST00000464484 666 ntTSL 2 BASIC23.01■■□□□ 1.27
LTN1O94822 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC23.01■■□□□ 1.27
LTN1O94822 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
LTN1O94822 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.01■■□□□ 1.27
LTN1O94822 LINC00628-201ENST00000628516 1289 ntBASIC23.01■■□□□ 1.27
LTN1O94822 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC23.01■■□□□ 1.27
LTN1O94822 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LTN1O94822 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.01■■□□□ 1.27
LTN1O94822 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23.01■■□□□ 1.27
LTN1O94822 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC23■■□□□ 1.27
LTN1O94822 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC23■■□□□ 1.27
LTN1O94822 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
LTN1O94822 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
LTN1O94822 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 AJ011932.1-201ENST00000621707 465 ntBASIC23■■□□□ 1.27
LTN1O94822 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23■■□□□ 1.27
LTN1O94822 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
LTN1O94822 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
LTN1O94822 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
LTN1O94822 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC23■■□□□ 1.27
LTN1O94822 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC23■■□□□ 1.27
LTN1O94822 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC23■■□□□ 1.27
LTN1O94822 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
LTN1O94822 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC23■■□□□ 1.27
LTN1O94822 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC23■■□□□ 1.27
LTN1O94822 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LTN1O94822 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
LTN1O94822 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC22.99■■□□□ 1.27
LTN1O94822 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LTN1O94822 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC22.99■■□□□ 1.27
LTN1O94822 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC22.99■■□□□ 1.27
LTN1O94822 GPS2P2-201ENST00000430745 888 ntBASIC22.99■■□□□ 1.27
LTN1O94822 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LTN1O94822 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LTN1O94822 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LTN1O94822 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC22.99■■□□□ 1.27
LTN1O94822 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
LTN1O94822 REXO1L3P-201ENST00000622202 1288 ntBASIC22.99■■□□□ 1.27
LTN1O94822 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC22.99■■□□□ 1.27
LTN1O94822 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.99■■□□□ 1.27
LTN1O94822 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC22.99■■□□□ 1.27
LTN1O94822 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.99■■□□□ 1.27
LTN1O94822 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LTN1O94822 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.99■■□□□ 1.27
LTN1O94822 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LTN1O94822 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
LTN1O94822 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LTN1O94822 KLK8-202ENST00000320838 456 ntTSL 5 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms