Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
TO15178 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.17■□□□□ 0.18
TO15178 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.17■□□□□ 0.18
TO15178 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.17■□□□□ 0.18
TO15178 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TO15178 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TO15178 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.17■□□□□ 0.18
TO15178 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 IFNL4P1-201ENST00000607083 540 ntBASIC16.17■□□□□ 0.18
TO15178 LINC00896-202ENST00000609602 2128 ntBASIC16.17■□□□□ 0.18
TO15178 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.17■□□□□ 0.18
TO15178 AC073592.4-201ENST00000623827 446 ntBASIC16.17■□□□□ 0.18
TO15178 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TO15178 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.17■□□□□ 0.18
TO15178 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.17■□□□□ 0.18
TO15178 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.17■□□□□ 0.18
TO15178 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.17■□□□□ 0.18
TO15178 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.17■□□□□ 0.18
TO15178 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TO15178 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
TO15178 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.16■□□□□ 0.18
TO15178 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.16■□□□□ 0.18
TO15178 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.16■□□□□ 0.18
TO15178 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TO15178 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.16■□□□□ 0.18
TO15178 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TO15178 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 AKR1C7P-201ENST00000305623 895 ntBASIC16.16■□□□□ 0.18
TO15178 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.16■□□□□ 0.18
TO15178 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.16■□□□□ 0.18
TO15178 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.16■□□□□ 0.18
TO15178 AL450487.1-201ENST00000426799 995 ntBASIC16.16■□□□□ 0.18
TO15178 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.16■□□□□ 0.18
TO15178 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.16■□□□□ 0.18
TO15178 UNC93B7-201ENST00000509439 705 ntBASIC16.16■□□□□ 0.18
TO15178 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.16■□□□□ 0.18
TO15178 KRT126P-201ENST00000549467 1181 ntBASIC16.16■□□□□ 0.18
TO15178 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 SIGLEC16-201ENST00000599858 1437 ntBASIC16.16■□□□□ 0.18
TO15178 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TO15178 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TO15178 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.16■□□□□ 0.18
TO15178 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TO15178 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TO15178 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.15■□□□□ 0.18
TO15178 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.15■□□□□ 0.18
TO15178 LYSMD4-203ENST00000378904 2122 ntBASIC16.15■□□□□ 0.18
TO15178 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.15■□□□□ 0.18
TO15178 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
TO15178 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TO15178 SPDYE21P-201ENST00000413323 827 ntBASIC16.15■□□□□ 0.18
TO15178 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TO15178 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.15■□□□□ 0.18
TO15178 SAPCD2P3-201ENST00000455031 850 ntBASIC16.15■□□□□ 0.18
TO15178 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.15■□□□□ 0.18
TO15178 STK19B-204ENST00000512515 211 ntBASIC16.15■□□□□ 0.18
TO15178 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TO15178 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
TO15178 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.15■□□□□ 0.18
TO15178 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.15■□□□□ 0.18
TO15178 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.15■□□□□ 0.18
TO15178 AC009336.1-201ENST00000608941 1553 ntBASIC16.15■□□□□ 0.18
TO15178 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.15■□□□□ 0.18
TO15178 AL355877.3-201ENST00000622820 899 ntBASIC16.15■□□□□ 0.18
TO15178 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TO15178 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.15■□□□□ 0.18
TO15178 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TO15178 AC079776.2-201ENST00000641154 1609 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms