Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.48■□□□□ 0.23
KPNA4O00629 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
KPNA4O00629 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KPNA4O00629 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.48■□□□□ 0.23
KPNA4O00629 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.48■□□□□ 0.23
KPNA4O00629 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.48■□□□□ 0.23
KPNA4O00629 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.48■□□□□ 0.23
KPNA4O00629 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.48■□□□□ 0.23
KPNA4O00629 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.48■□□□□ 0.23
KPNA4O00629 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.48■□□□□ 0.23
KPNA4O00629 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KPNA4O00629 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
KPNA4O00629 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.47■□□□□ 0.23
KPNA4O00629 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.47■□□□□ 0.23
KPNA4O00629 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
KPNA4O00629 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
KPNA4O00629 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
KPNA4O00629 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.47■□□□□ 0.23
KPNA4O00629 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.47■□□□□ 0.23
KPNA4O00629 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.47■□□□□ 0.23
KPNA4O00629 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.47■□□□□ 0.23
KPNA4O00629 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
KPNA4O00629 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.47■□□□□ 0.23
KPNA4O00629 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.47■□□□□ 0.23
KPNA4O00629 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.47■□□□□ 0.23
KPNA4O00629 AL512604.3-201ENST00000569583 964 ntBASIC16.47■□□□□ 0.23
KPNA4O00629 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.47■□□□□ 0.23
KPNA4O00629 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KPNA4O00629 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
KPNA4O00629 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
KPNA4O00629 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KPNA4O00629 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
KPNA4O00629 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KPNA4O00629 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.46■□□□□ 0.23
KPNA4O00629 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.46■□□□□ 0.23
KPNA4O00629 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.46■□□□□ 0.23
KPNA4O00629 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.46■□□□□ 0.23
KPNA4O00629 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KPNA4O00629 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.46■□□□□ 0.23
KPNA4O00629 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.46■□□□□ 0.23
KPNA4O00629 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.46■□□□□ 0.23
KPNA4O00629 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.46■□□□□ 0.23
KPNA4O00629 AC092865.7-201ENST00000641832 219 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms