Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 KRT18P55-202ENST00000578578 1546 ntBASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 PKD1P1-201ENST00000458669 6805 ntBASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 AC040169.1-201ENST00000565382 521 ntBASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 AL139424.1-201ENST00000607572 797 ntBASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TBC1D3FA6NER0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TBC1D3FA6NER0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 AC097637.2-201ENST00000624096 1997 ntBASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TBC1D3FA6NER0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 MYCLP1-201ENST00000372451 1075 ntBASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 ELK2BP-201ENST00000415014 1224 ntBASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 AC002558.1-201ENST00000488906 803 ntBASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms