Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 LYSMD4-203ENST00000378904 2122 ntBASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 AC019129.2-201ENST00000609837 1235 ntBASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC162PA2VCL2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 AC124067.4-201ENST00000519691 2379 ntBASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 KRT17P6-201ENST00000453795 1220 ntBASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 AC002558.1-201ENST00000488906 803 ntBASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 Z69720.1-201ENST00000601483 472 ntBASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 AC092119.3-201ENST00000612618 583 ntBASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC162PA2VCL2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 AC106820.2-201ENST00000563775 3264 ntBASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 FAM220CP-201ENST00000395253 831 ntBASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 AC122714.2-201ENST00000502787 707 ntBASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 AC009533.2-201ENST00000543664 586 ntBASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 AC109462.3-201ENST00000573934 613 ntBASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 AL023806.1-201ENST00000603994 1649 ntBASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC162PA2VCL2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms