Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC189A1A4V9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC189A1A4V9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC189A1A4V9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC189A1A4V9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CCDC189A1A4V9 AC133963.1-201ENST00000504166 1679 ntBASIC17.64■□□□□ 0.42
CCDC189A1A4V9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CCDC189A1A4V9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC189A1A4V9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 DDX43P3-201ENST00000441064 443 ntBASIC17.64■□□□□ 0.41
CCDC189A1A4V9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC189A1A4V9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 AL138688.1-201ENST00000624851 1594 ntBASIC17.63■□□□□ 0.41
CCDC189A1A4V9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC189A1A4V9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC189A1A4V9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms