Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN1Q9UMX0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN1Q9UMX0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.83■□□□□ 0.61
UBQLN1Q9UMX0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.83■□□□□ 0.61
UBQLN1Q9UMX0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBQLN1Q9UMX0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 AC012640.2-201ENST00000561606 901 ntBASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 NCF1C-201ENST00000438382 1427 ntBASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN1Q9UMX0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 AL139327.4-201ENST00000612362 153 ntBASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
UBQLN1Q9UMX0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 AP000347.1-202ENST00000435868 847 ntBASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 AC092910.1-201ENST00000482027 1129 ntBASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN1Q9UMX0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN1Q9UMX0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms