Protein–RNA interactions for Protein: Q9UJT0

TUBE1, Tubulin epsilon chain, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1Q9UJT0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 MRPL3P1-201ENST00000400109 1033 ntBASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 AP000347.1-202ENST00000435868 847 ntBASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 MIR5100-201ENST00000579544 119 ntBASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBE1Q9UJT0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TUBE1Q9UJT0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 AC009949.1-201ENST00000623048 1830 ntBASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 AD000864.1-201ENST00000624076 2295 ntBASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 AC099398.1-201ENST00000567919 2776 ntBASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBE1Q9UJT0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TUBE1Q9UJT0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms